If your completed objectives in Subnautica 2 are still stuck on your screen, don’t worry — you’re not alone. Many players are currently dealing with a frustrating waypoint bug where quest markers refuse to disappear after finishing objectives like Angel Comb, Tadpole Pens, and Alien Ruins.
The good news is that the issue usually doesn’t break progression, and there are a few quick fixes that can help remove the persistent markers while waiting for an official patch.
Right now, this appears to be one of the more common Early Access UI bugs players are encountering.
Instead of clearing properly after a mission is completed, some objective markers remain permanently visible on the HUD and PDA map.
While it can make exploration feel cluttered, most community reports suggest the bug is mainly visual and doesn’t stop story progression, blueprint unlocks, or new objectives from appearing.
Players across Reddit, Discord, and Steam forums have reported similar issues with NOA objectives and exploration-based quests, especially during mid-game progression.
Thankfully, manually disabling the markers through the PDA waypoint menu usually fixes the problem immediately. Some players have also had success after saving and reloading their game or progressing further into the story.
Read Also: Bioreactor Not Accepting Fuel? in Subnautica 2 : Solved
Why Are Quest Markers Not Disappearing in Subnautica 2?
Right now, this appears to be a known Early Access bug affecting the game’s waypoint system. Normally, objective markers should automatically vanish once a task is completed, but some players are finding that certain markers remain permanently active on the HUD and PDA map.
The issue seems to happen when the game fails to properly clear completed objective data after a mission finishes. Instead of removing the waypoint entirely, the marker stays visible even though the quest itself has already been completed in the background. While this can make your map feel cluttered and confusing during exploration, it thankfully doesn’t appear to seriously affect gameplay progression for most players.
The Subnautica 2 waypoint bug has been commonly reported for:
- Angel Comb marker
- Tadpole Pens marker
- Alien Ruins marker
- NOA objective markers
- Exploration and biome discovery quests
Community discussions across Reddit, Steam forums, and Discord suggest the quests themselves are still completing correctly — only the objective markers remain stuck. Many players are still able to continue the story, unlock blueprints, and trigger new objectives normally despite the persistent markers remaining on-screen.
Read also: Subnautica 2 Advanced Battery Guide: Recipe, Materials, and How to Unlock
How to Fix the Subnautica 2 Marker Bug
At the moment, there isn’t a permanent official fix for the Subnautica 2 quest marker bug, but several community-tested workarounds are helping players remove persistent waypoints and clean up their HUD. Since the issue appears to be tied to the game’s waypoint tracking system, most fixes focus on manually refreshing or disabling the markers.
Thankfully, the bug is usually more annoying than game-breaking, and most players can continue progressing normally even if the markers stay active.
Turn Off the Waypoint Manually
The simplest and most reliable fix right now is manually disabling the stuck marker through the PDA waypoint menu.
- Open your PDA
- Navigate to the Waypoints tab
- Locate the stuck objective marker
- Toggle the waypoint OFF
For most players, this immediately removes the marker from both the map and HUD. This workaround has been especially effective for persistent markers tied to Angel Comb, Tadpole Pens, Alien Ruins, and various NOA exploration objectives.
If your Subnautica 2 markers won’t disappear automatically after completing quests, manually turning them off is currently the best solution available until Unknown Worlds releases an official fix in a future Early Access update.
Save and Reload Your Game
Sometimes the Subnautica 2 waypoint system simply fails to refresh correctly after completing an objective. Because of this, a quick save reload can occasionally force the game to properly update bugged quest markers and remove persistent waypoints from the HUD.
Try the following:
- Save your game
- Return to the main menu
- Reload your save file
Many players report that the Subnautica 2 markers not disappearing bug fixes itself after restarting the session. While it doesn’t work every time, it’s one of the easiest troubleshooting methods to try before manually disabling markers.
Revisit the Objective Location
Oddly enough, revisiting the original quest area can sometimes trigger the game to properly recognize the objective as completed. This appears to refresh certain stuck mission states tied to exploration objectives and NOA progression.
This workaround has helped players dealing with:
- Alien Ruins markers staying active
- Tadpole Pens waypoint bug
- Persistent Angel Comb objectives
- Exploration markers refusing to disappear
If your Subnautica 2 quest marker is stuck on-screen, returning to the original location for a few moments may force the waypoint to finally clear.
Progress Further Into the Story
Some persistent markers eventually disappear after unlocking the next major mission, biome, or NOA objective. Because of this, many players simply continue progressing through the game normally until the waypoint system updates itself later.
So if the marker remains visible but your progression still works correctly, it’s usually safe to continue playing without worrying about a softlock.
Does the Marker Bug Break Progression?
Thankfully, most community reports suggest the Subnautica 2 persistent markers bug is primarily a visual UI issue rather than a serious progression problem.
Players are still able to:
- Unlock blueprints
- Continue story progression
- Explore deeper biomes
- Trigger new objectives
- Complete crafting milestones
- Access new exploration areas
So while the stuck waypoint bug can definitely clutter your HUD and map, it doesn’t currently appear to permanently break saves in most cases.
Why This Bug Is Happening
Since Subnautica 2 is currently in Early Access, bugs involving UI systems, waypoint tracking, and mission triggers are fairly common during development. Large survival games with exploration-heavy progression often go through multiple adjustments to quest logic and objective tracking before full release.
Right now, the issue likely happens because the waypoint cleanup system isn’t properly removing completed quest data in certain situations. Instead of clearing old objectives automatically, the game sometimes leaves the markers permanently active even after the mission has already been completed in the background.
As more hotfixes and patches release, this Subnautica 2 waypoint bug will likely be improved over time.
Will Unknown Worlds Fix It?
Most likely, yes. The Subnautica 2 quest marker stuck bug is quickly becoming one of the more widely discussed Early Access UI problems in the community, with players across Reddit, Discord, and Steam forums reporting persistent waypoint issues tied to story and exploration objectives.
Because the problem appears to be connected to the game’s waypoint tracking and objective cleanup system rather than actual progression logic, it’s exactly the kind of issue that typically gets addressed during Early Access hotfixes.
Unknown Worlds has already been actively releasing patches and bug fixes for Subnautica 2, so there’s a strong chance persistent quest markers will be improved in a future update.
Until then, manually managing waypoints through the PDA remains the best workaround available. While it’s not a perfect fix, it does let players remove cluttered HUD markers and continue exploring normally without major gameplay issues.
Final Thoughts
The Subnautica 2 markers not disappearing bug can definitely become annoying over time, especially once multiple completed objectives start piling up across your HUD and map.
Persistent markers tied to Angel Comb, Tadpole Pens, Alien Ruins, and other NOA objectives have become fairly common for players progressing through the Early Access build.
Thankfully, the issue doesn’t currently appear to seriously affect gameplay progression in most cases. Players are still able to unlock blueprints, continue story missions, discover new biomes, and trigger future objectives normally even if old markers remain visible.
For now, manually disabling the markers through the PDA waypoint menu is still the easiest and most reliable fix available. Until Unknown Worlds releases an official patch for the Subnautica 2 waypoint bug, that workaround should help keep your map a little cleaner while exploring the ocean depths.